ToMMo has completed whole genome sequence analysis for 50,000 who participated in TMM cohort studies. This is one of the largest whole genome sequence analyses of a general population in the world, following in the footsteps of UK Biobank and All of US in USA. We expect to contribute to innovative discovery and various research and development in science and medicine in the future. Based on this study, the Japanese Whole Genome Reference Panel, referred to as 38KJPN, consisting of allele and genotype frequency panels from approximately 38,000 Japanese individuals that are estimated to be unrelated to each other, has been published in the database jMorp.

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Genome Variation (38KJPN-SNV/INDEL)

38KJPN, an SNV/INDEL allele and genotype frequency panels from approximately 38,000 Japanese individuals, were released. We also updated our repository page which describes a summary of ToMMo's whole genome analysis for 50,000 persons.
*Frequencies of variants on the X chromosome and mitochondria will be available soon.

variation table page (jMorp)
genome browser (jMorp)
repository page (jMorp)

Genome Variation (38KJPN-HLA)

We have analyzed HLA genes of individuals included in the 38KJPN-SNV/INDEL and constructed a frequency panel 38KJPN-HLA.

variation list page (jMorp)
downloads page (jMorp)

How to use jMorp

Please refer to the link below.
https://jmorp.megabank.tohoku.ac.jp/help/tutorial

Related Link

Genome information for 14,000 people is now available -jMorp 2021 major update-（2021/12/27）

Allele frequency data of the 8.3KJPN has been released from dbSNP（2021/06/29）

Constructing the First Version of the Japanese Reference Genome [Press Release]（2021/01/29）