Tohoku University Tohoku Medical Megabank Organization (2013)

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9.   Nariai Naoki, Hirose Osamu, Kojima Kaname, Nagasaki Masao. TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference. Bioinformatics. 2013; 29 (18): 2292-2299. doi:10.1093/bioinformatics/btt381  
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12.   Miura Naoki, Akitsuki Yuko, Sekiguchi Atsushi, Kawashima Ryuta. Activity in the primary somatosensory cortex induced by reflexological stimulation is unaffected by pseudo-information: a functional magnetic resonance imaging study. BMC Complementary and Alternative Medicine. 2013; 13 (1): 114. doi:10.1186/1472-6882-13-114  
13.   Sekiguchi Atsushi, Sugiura Motoaki, Yokoyama Satoru, et al. Neural correlates of adaptive social responses to real-life frustrating situations: a functional MRI study. BMC Neuroscience. 2013; 14 (1): 29. doi:10.1186/1471-2202-14-29  
14.   Tamai Hiroshi, Ishida Kazuyuki, Murakami Kensuke, et al. Compression neuropathy caused by cancer metastasis to the optic nerve canal. BMC Research Notes. 2013; 6 (1): 546. doi:10.1186/1756-0500-6-546  
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16.   Mimori Takahiro, Nariai Naoki, Kojima Kaname, et al. iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data. BMC Systems Biology. 2013; 7 (S6): S8. doi:10.1186/1752-0509-7-S6-S8  
17.   Miyamatsu Naomi, Okamura Tomonori, Nakayama Hirofumi, et al. Public awareness of early symptoms of stroke and information sources about stroke among the general Japanese population: The acquisition of stroke knowledge study. Cerebrovascular Diseases. 2013; 35 (3): 241-249. doi:10.1159/000347066  
18.   Obara Taku, Kikuya Masahiro, Kobayashi Yuka, et al. Associations Between Visit-to-visit Variability in Blood Pressure Measured in the Office and Antihypertensive Drugs: The J-HOME-Morning Study. Clinical and Experimental Hypertension. 2013; 35 (4): 285-290. doi:10.3109/10641963.2013.780070  
19.   Ogishima S, Mizuno S, Kikuchi M, et al. A Map of Alzheimer’s Disease–Signaling Pathways: A Hope for Drug Target Discovery. Clinical Pharmacology & Therapeutics. 2013; 93 (5): 399-401. doi:10.1038/clpt.2013.37  
20.   Wu Kai, Taki Yasuyuki, Sato Kazunori, et al. A longitudinal study of structural brain network changes with normal aging. Frontiers in Human Neuroscience. 2013; 7 (APR 2013): . doi:10.3389/fnhum.2013.00113  
21.   Takeuchi Hikaru, Taki Yasuyuki, Sekiguchi Atsushi, et al. Association of hair iron levels with creativity and psychological variables related to creativity. Frontiers in Human Neuroscience. 2013; 7 (DEC): 875. doi:10.3389/fnhum.2013.00875  
22.   Mukai Harumi Y., Suzuki Mikiko, Nagano Masumi, et al. Establishment of erythroleukemic GAK14 cells and characterization of GATA1 N-terminal domain. Genes to Cells. 2013; 18 (10): n/a-n/a. doi:10.1111/gtc.12084  
23.   Suzuki Mikiko, Kobayashi-Osaki Maki, Tsutsumi Shuichi, et al. GATA factor switching from GATA2 to GATA1 contributes to erythroid differentiation. Genes to Cells. 2013; 18 (11): 921-933. doi:10.1111/gtc.12086  
24.   Shimizu Ritsuko, Hasegawa Atsushi, Ottolenghi Sergio, et al. Verification of the in vivo activity of three distinct cis -acting elements within the Gata1 gene promoter-proximal enhancer in mice. Genes to Cells. 2013; 18 (11): 1032-1041. doi:10.1111/gtc.12096  
25.   Niu Kaijun, Guo Hui, Kakizaki Masako, et al. A tomato-rich diet is related to depressive symptoms among an elderly population aged 70 years and over: A population-based, cross-sectional analysis. Journal of Affective Disorders. 2013; 144 (1-2): 165-170. doi:10.1016/j.jad.2012.04.040  
26.   Kasahara Kota, Shirota Matsuyuki, Kinoshita Kengo. Comprehensive classification and diversity assessment of atomic contacts in protein-small ligand interactions. Journal of Chemical Information and Modeling. 2013; 53 (1): 241-248. doi:10.1021/ci300377f  
27.   Kon Shunsuke, Minegishi Naoko, Tanabe Kenji, et al. Smap1 deficiency perturbs receptor trafficking and predisposes mice to myelodysplasia. Journal of Clinical Investigation. 2013; 123 (3): 1123-1137. doi:10.1172/JCI63711  
28.   Kondo Imako, Ojima Toshiyuki, Nakamura Mieko, et al. Consumption of dairy products and death from cardiovascular disease in the Japanese general population: the NIPPON DATA80. Journal of epidemiology / Japan Epidemiological Association. 2013; 23 (1): 47-54. doi:10.2188/jea.JE20120054  
29.   Nakamura Atsushi, Ebina-Shibuya Risa, Itoh-Nakadai Ari, et al. Transcription repressor Bach2 is required for pulmonary surfactant homeostasis and alveolar macrophage function. Journal of Experimental Medicine. 2013; 210 (11): 2191-2204. doi:10.1084/jem.20130028  
30.   Konno Satoshi, Hozawa Atsushi, Miura Yukio, et al. High-normal diastolic blood pressure is a risk for development of microalbuminuria in the general population. Journal of Hypertension. 2013; 31 (4): 798-804. doi:10.1097/HJH.0b013e32835e2146  
31.   Kanno Atsuhiro, Kikuya Masahiro, Asayama Kei, et al. Night-time blood pressure is associated with the development of chronic kidney disease in a general population. Journal of Hypertension. 2013; 31 (12): 2410-2417. doi:10.1097/HJH.0b013e328364dd0f  
32.   Kakizaki Masako, Kuriyama Shinichi, Nakaya Naoki, et al. Long sleep duration and cause-specific mortality according to physical function and self-rated health: The ohsaki cohort study. Journal of Sleep Research. 2013; 22 (2): 209-216. doi:10.1111/j.1365-2869.2012.01053.x  
33.   Souma Tomokazu, Yamazaki Shun, Moriguchi Takashi, et al. Plasticity of Renal Erythropoietin-Producing Cells Governs Fibrosis. Journal of the American Society of Nephrology. 2013; 24 (10): 1599-1616. doi:10.1681/ASN.2013010030  
34.   Mutoh Tatsushi, Taki Yasuyuki, Tsubone Hirokazu. Desflurane but not sevoflurane augments laryngeal C-fiber inputs to nucleus tractus solitarii neurons by activating transient receptor potential-A1. Life Sciences. 2013; 92 (14-16): 821-828. doi:10.1016/j.lfs.2013.02.015  
35.   Suzuki Mikiko, Yamazaki Hiromi, Mukai Harumi Y., et al. Disruption of the Hbs1l-Myb Locus Causes Hereditary Persistence of Fetal Hemoglobin in a Mouse Model. Molecular and Cellular Biology. 2013; 33 (8): 1687-1695. doi:10.1128/MCB.01617-12  
36.   Suzuki Takafumi, Shibata Tatsuhiro, Takaya Kai, et al. Regulatory Nexus of Synthesis and Degradation Deciphers Cellular Nrf2 Expression Levels. Molecular and Cellular Biology. 2013; 33 (12): 2402-2412. doi:10.1128/MCB.00065-13  
37.   Shibata Kyoko, Hozawa Atsushi, Tamiya Gen, et al. The confounding effect of cryptic relatedness for environmental risks of systolic blood pressure on cohort studies. Molecular Genetics & Genomic Medicine. 2013; 1 (1): 45-53. doi:10.1002/mgg3.4  
38.   Yamazaki Shun, Souma Tomokazu, Hirano Ikuo, et al. A mouse model of adult-onset anaemia due to erythropoietin deficiency. Nature Communications. 2013; 4 (1): 1950. doi:10.1038/ncomms2950  
39.   Suzuki Norio, Hirano Ikuo, Pan Xiaoqing, et al. Erythropoietin production in neuroepithelial and neural crest cells during primitive erythropoiesis. Nature Communications. 2013; 4 (1): 2902. doi:10.1038/ncomms3902  
40.   Kon Ayana, Shih Lee-Yung, Minamino Masashi, et al. Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms. Nature Genetics. 2013; 45 (10): 1232-1237. doi:10.1038/ng.2731  
41.   Shi Lihong, Cui Shuaiying, Engel James D, Tanabe Osamu. Lysine-specific demethylase 1 is a therapeutic target for fetal hemoglobin induction. Nature Medicine. 2013; 19 (3): 291-294. doi:10.1038/nm.3101  
42.   Suzuki Hideaki, Sumiyoshi Akira, Taki Yasuyuki, et al. Voxel-based morphometry and histological analysis for evaluating hippocampal damage in a rat model of cardiopulmonary resuscitation. NeuroImage. 2013; 77 : 215-221. doi:10.1016/j.neuroimage.2013.03.042  
43.   Taki Yasuyuki, Kinomura Shigeo, Ebihara Satoru, et al. Correlation between pulmonary function and brain volume in healthy elderly subjects. Neuroradiology. 2013; 55 (6): 689-695. doi:10.1007/s00234-013-1157-6  
44.   Shi Dong, Funayama Tomoyo, Mashima Yukihiko, et al. Association of HK2 and NCK2 with Normal Tension Glaucoma in the Japanese Population. PLoS ONE. 2013; 8 (1): e54115. doi:10.1371/journal.pone.0054115  
45.   Miya Masaki, Friedman Matt, Satoh Takashi P., et al. Evolutionary Origin of the Scombridae (Tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families. PLoS ONE. 2013; 8 (9): e73535. doi:10.1371/journal.pone.0073535  
46.   Kikuchi Masataka, Ogishima Soichi, Miyamoto Tadashi, et al. Identification of Unstable Network Modules Reveals Disease Modules Associated with the Progression of Alzheimer’s Disease. PLoS ONE. 2013; 8 (11): e76162. doi:10.1371/journal.pone.0076162  
47.   Kasahara Kota, Shirota Matsuyuki, Kinoshita Kengo. Ion Concentration-Dependent Ion Conduction Mechanism of a Voltage-Sensitive Potassium Channel. PLoS ONE. 2013; 8 (2): e56342. doi:10.1371/journal.pone.0056342  
48.   Inohara Taku, Kohsaka Shun, Okamura Tomonori, et al. Long-Term Outcome of Healthy Participants with Atrial Premature Complex: A 15-Year Follow-Up of the NIPPON DATA 90 Cohort. PLoS ONE. 2013; 8 (11): e80853. doi:10.1371/journal.pone.0080853  
49.   Razak Siti Razila Abdul, Ueno Kazuko, Takayama Naoya, et al. Profiling of MicroRNA in Human and Mouse ES and iPS Cells Reveals Overlapping but Distinct MicroRNA Expression Patterns. PLoS ONE. 2013; 8 (9): e73532. doi:10.1371/journal.pone.0073532  
50.   Okuyama K., Ikawa T., Gentner B., et al. MicroRNA-126-mediated control of cell fate in B-cell myeloid progenitors as a potential alternative to transcriptional factors. Proceedings of the National Academy of Sciences. 2013; 110 (33): 13410-13415. doi:10.1073/pnas.1220710110  
51.   Hiramoto Takafumi, Ebihara Yasuhiro, Mizoguchi Yoko, et al. Wnt3a stimulates maturation of impaired neutrophils developed from severe congenital neutropenia patient-derived pluripotent stem cells. Proceedings of the National Academy of Sciences. 2013; 110 (8): 3023-3028. doi:10.1073/pnas.1217039110  
52.   Shirota Matsuyuki, Kinoshita Kengo. Analyses of the general rule on residue pair frequencies in local amino acid sequences of soluble, ordered proteins. Protein Science. 2013; 22 (6): 725-733. doi:10.1002/pro.2255  
53.   Hozawa Atsushi, Sugawara Yumi, Tomata Yasutake, et al. Relationship Between Serum Isoflavone Levels and Disability-Free Survival Among Community-Dwelling Elderly Individuals: Nested Case-Control Study of the Tsurugaya Project. The Journals of Gerontology Series A: Biological Sciences and Medical Sciences. 2013; 68 (4): 465-472. doi:10.1093/gerona/gls198  
54.   菅原 準一. 東北メディカル・メガバンク事業―次世代の医療モデルを実現するために―. 宮城県産婦人科医会誌. 2013; 120 : 6-9.  
55.   事崎 由佳, 竹内 光, 関口 敦, et al. デイリー・ハッスルズに対するバイオフィードバック介入の効果. 人工知能学会論文誌. 2013; 571 : 1-4.  
56.   菅原 準一. 3.11 周産期医療に何が起こったか. 石川産科婦人科学会雑誌. 2013; 3 : 18-19.  
57.   菅原 準一. プライマリケアがお産を守る!大震災後の周産期医療と東北メディカル・メガバンク事業 災害時に母児を守る!その医療活動から見えてきたもの. 日本医事新報. 2013; 4637 : 25-29.  
58.   布施 昇男、清水 愛、木村 雅恵、高野 良真、石 棟、宮澤 晃子、国松 志保、劉 孟林、渡邊 亮、安田 正幸、横山 悠、檜森 紀子、津田 聡、山本 耕太郎、中澤 徹、安田 純、勝岡 史城、小島 要、成相 直樹、松本 光代、元池 育子、長崎 正朗、木下 賢吾、五十嵐 和彦、山本 雅之、新堀 哲也、青木 洋子、松原 洋一、舟山 亮、長嶋 剛史、中山 啓子、眞島 行彦、舟山 智代、田中 光一、原田 高幸、阿部 春樹、福地 健郎、安田 典子、出田 秀尚、鄭 暁東、白石 敦、大橋 祐一、石田 誠夫、原 岳、金森 章. 緑内障のゲノム解析―次世代医療•個別化医療に向けて. 日本眼科学会雑誌. 2013; 118 ((3)): 216-240.  
59.   清元 秀泰. 遺伝子・組織バンクと医療情報の電子化 被災地から最先端創薬を目指して~東北メディカル・メガバンク機構の挑戦~. 臨床薬理. 2013; 44 : 175-176.